phylocurve offers a variety of phylogenetic comparative tools for studying the evolution of function-valued traits, including ancestral state reconstruction, estimating phylogenetic signal, and assessing correlated function-valued trait evolution.
Phylocurve is availabe on CRAN. To get the most recent (development) version of phylocurve, run the following code in R:
require(devtools)
install_github(repo="ericgoolsby/phylocurve")
Rphylopars offers a variety of tools for performing phylogenetic comparative methods for datasets with with multiple observations per species (intraspecific variation or measurement error) and/or missing data. Available functions allow ancestral state reconstruction, missing data imputation, phylogenetic regression (phylogenetic generalized least squares), and phylogenetic principal components analysis (pPCA).
To get the most recent version of Rphylopars, run the following code in R:
require(devtools)
install_github(repo="ericgoolsby/Rphylopars")